Array of Expertise
We have a large network of PhD bioinformaticians with complementary skillsets that span computational genomics, statistical genetics, biostatistics, and machine learning.
We provide support at all phases of the research cycle, from experimental design through publication.
On request, we can write a report, including methods, results, and figures with the code used, interactive data visualizations, and more.
We and/or our partners have experience working with a variety of organisms including: animals (especially mammals), protists, plants, fungi, bacteria, and viruses.
NGS and more
Functional genomics analyses illuminate the role of genes in a molecular pathway and their interactions with other genes and proteins. We can build custom analytical pipelines to get more from your data.
We can analyze gene expression data from bulk and single cell RNA-seq, and perform network analyses such as WGCNA. This can form the basis for multi-modal integration.
We can also analyze epigenomic data, including but not limited to DNA methylation, chromatin modifications, and non-canonical histone usage.
Network analysis uses the relationships among features to make complex biological data more comprehensible. WGCNA provides richer insights into transcriptomic and epigenomic data than possible with more traditional methods such as differential expression. We work with experienced bioinformaticians, including those who developed the core methods, to provide rapid, quality WGCNA analyses. If your data includes measurements from at least 20 samples (the more the better!), WGCNA might be a great fit for you.
Integrative Systems Biology
Integrative systems biology combines diverse high-throughput experiments and databases to gain new insights into biological processes or systems at molecular and physiological levels.
We offer a variety of integrative analyses using:
- Functional interaction networks
- Clinical metadata
We use statistical and bioinformatics analyses to link genetic sequence variation to development of disease.
We can help diligence candidate drug targets using methods such as: GWAS, TWAS, WES/WGS, eQTL, isoQTL, survival analysis, immunopeptidomics, phenotype characterization, and more. Additionally, we have experience working with TCGA, UK Biobank, and many dbGaP datasets.
We are happy to work with your in-house bioinformaticians to augment their capabilities. We offer bespoke tutorials to upskill your internal team. We also provide contingency recruitment services to help you reach bioinformaticians in our network.
Through strategic partnerships, we can help you find support for:
- Microbiome analyses
- Bioinformatics cloud computing
- Bioinformatics software development
- Equipment leasing
- And more!
If your project needs aren’t listed, schedule a call with us, and we can direct you to the right place.
“Working with the Bioinformatics CRO got us thoughtful answers to mission critical questions quickly and seamlessly. Had we opted to build out an internal solution, we would have already spent many multiples of what we did and still be waiting on the results. I love working with the Bioinformatics CRO and sleep easy at night knowing they’re on the job. Strongest possible recommendation.” – Dr. Brett Abrahams, Vice President at Magnolia Neurosciences Corporation
Meet Our Scientists
Márton has a PhD (DPhil) in bioinformatics from the University of Oxford (with his doctoral thesis in structural bioinformatics and molecular dynamics) and an MSc in physics. He has worked on various exciting projects involving high-throughput sequencing including clinical targeted and whole exome sequencing, immune repertoire sequencing and gene expression microarray analysis.