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More Bioinformatics Jobs

Assistant Professor of Clinical Tranlational Genomics (Masters...

California
2023/10/07.

The University of Southern California (USC), founded in 1880, is the largest private employer in the City of Los Angeles. As an employee of USC, you will be a part of a world-class research university and a member of the "Trojan Family," which is comprised of the faculty, students and staff that make the university what it is. The Department of Translational Genomics seeks faculty candidates at... the Assistant Professor level, to serve as Assistant Professor of Clinical Translational Genomics and Director for their Masters in Bioinformatics Program. Prior teaching experience at the graduate level is required. Expertise in one or more of the following areas is highly desired: Bioinformatics, Computational Biology, Analysis of Next-generation Sequencing Data, and/or Genomics. Potential candidates are encouraged to submit their applications (along with current CV, statement of teaching interests, and two or more letters of recommendation) to: Laura Hui, Department Administrator for the Department of Translational Genomics - University of Southern California, via e-mail @ lhui@usc.edu. The annual base salary range for this position is $124,326-$144,643. When extending an offer of employment, the University of Southern California considers factors such as (but not limited to) the scope and responsibilities of the position, the candidate’s work experience, education/training, key skills, internal peer equity, federal, state, and local laws, contractual stipulations, grant funding, as well as external market and organizational considerations. Review of applications will begin immediately. Position will remain open until filled. The University of Southern California strongly values diversity and is committed to equal opportunity in employment. Women and men, and members of all racial and ethnic groups, people with disabilities, and veterans are encouraged to apply

Sr Bioinformatics Research Scientist/Bioinformatic Research Scientist

United States
2023/10/07.

Come join an excellent team of researchers dedicated to coming closer to the mission of St Jude, that no child will die in the dawn of life. We are looking for a highly skilled and motivated Senior Bioinformatics Research Scientist/Bioinformatic Research Scientist to join our prestigious Blue Sky Kinase project. Led by Babis Kalodimos and Madan Babu , this exciting initiative is funded by over... $50 million, providing exceptional resources and research conditions. As a Senior Bioinformatics Research Scientist/Bioinformatic Research Scientist, you will play a pivotal role in our ligand discovery team, led by Dr. Christoph Gorgulla. Your primary mission will be to identify novel hit/lead compounds, with a particular focus on kinases, and optimize them to obtain new tool compounds and drug candidates for the treatment of various diseases. Leveraging state-of-the-art computational methods, including structure-based virtual screenings, (quantum and classical) free energy simulations, and machine-learning techniques, you will contribute to groundbreaking research in the field. Collaboration is at the heart of our work, and you will closely collaborate with our computational and wet-lab colleagues to validate and experimentally verify the predicted hit and lead compounds. By working together in a collaborative and intellectually stimulating environment, you will have the opportunity to contribute to multiple ligand/drug discovery projects and make a lasting impact on the lives of children fighting cancer and other life-threatening diseases. At St. Jude, working is more than just a job – it’s a calling. Each member of our team is united by a shared purpose: finding cures and saving children. In addition to the meaningful work you will undertake, we offer a range of perks to enhance your experience, including access to an on-site gym, an excellent benefits package, and an exceptionally warm and friendly atmosphere. To learn more about the unexpected perks of working at St. Jude, visit our website at https://www.stjude.org/jobs/hospital/talent-talks/10-unexpected-perks-of-working-at-st-jude.html We understand the evolving nature of work and offer remote/hybrid work arrangements, which can be discussed on a case-by-case basis. The anticipated start date for this position is early July, although we are flexible to accommodate the needs of exceptional candidates. Job Responsibilities: • Lead computationally focused scientific research projects with minimal to moderate supervision. • Computational discovery of hit and lead compounds targeting proteins (mostly kinases). • Using structure-based virtual screens (of ultra-large scale) using VirtualFlow, free energy simulations (quantum and classical), MD simulations, high-performance computing, cloud computing, and machine learning-based methods. • Predicting molecular properties of small molecules (using existing methods/software). • Identify, process, organize, summarize, review, and report relevant data. Managing molecular databases that contain discovered hit and lead compounds. • Interacting and collaborating with wet lab scientists on drug discovery projects, who will carry out the experimental validation of the discovered hit and lead compounds. • Interacting and collaborating with other computational colleagues of the team. • Manuscript preparation, submission, and the review process will be part of their responsibilities, under the supervision of Dr.Gorgulla, ensuring that the lab’s findings are disseminated to the scientific community. • Actively participate in independent research projects and collaborate with interdepartmental teams, fostering interdisciplinary approaches to solving complex scientific challenges. • Present research findings to internal and external audiences, contributing to the hospital’s mission of advancing pediatric research. • In the case of recent Ph.D. graduates, this position can be considered equivalent to a mentored postdoctoral position. Minimum Education: • Bachelor’s degree in bioinformatics, cheminformatics, statistics/computer science (with a background in biological sciences or chemistry) or related field. • Master’s degree or PhD preferred. Senior Bioinformatic Research Scientist Minimum Experience: • Minimum Requirement: Bachelor’s degree with 7+ years of relevant post-degree work in bioinformatics, cheminformatics, statistics/computer science (with a background in biological sciences or chemistry). • Experience Exception: Master’s degree with 5+ years of relevant post-degree experience (OR) PhD with 2+ years of relevant post-degree experience. • Significant experience in at least one programming or scripting language and at least one statistical package, with R preferred. Bioinformatic Research Scientist Minimum Experience: • Minimum Requirement: Bachelor’s degree with 6+ years of relevant post-degree work in bioinformatics, cheminformatics, statistics/computer science (with a background in biological sciences or chemistry). • Experience Exception: Master’s degree with 4+ years of relevant post-degree experience (OR) PhD with no experience. • Experience in at least one programming or scripting language and at least one statistical package, with R preferred. St. Jude Children’s Research Hospital has a diverse, global patient population and workforce, built on the principles of diversity, equity and inclusion. Our founder Danny Thomas envisioned a hospital that would treat children of the world-regardless of race, religion or a family’s ability to pay. Learn more about our history and commitment . Today, we continue the mission to advance cures and means of prevention for pediatric catastrophic diseases through research and treatment. As we accelerate this progress globally, we believe our legacy of diversity, equity and inclusion is foundational to success. With the commitment of leaders at all levels of the organization, we strive to ensure the St. Jude culture, leadership approaches and talent processes are equitable and culturally responsive. View our Diversity, Equity and Inclusion Report to learn about the hospital’s roots in diversity, equity and inclusion, where we are today and our aspirations for an even better future. Other Information St. Jude is an Equal Opportunity Employer No Search Firms St. Jude Children’s Research Hospital does not accept unsolicited assistance from search firms for employment opportunities. Please do not call or email. All resumes submitted by search firms to any employee or other representative at St. Jude via email, the internet or in any form and/or method without a valid written search agreement in place and approved by HR will result in no fee being paid in the event the candidate is hired by St. Jude. Tagged as: Computer Science

Bioinformatics Co-op

Anywhere
2023/10/07.

In partnership with our client, who is a major Life Science organization, we are seeking Coop students for Spring 2024, with a flexible starting date as early as October or November 2023. The position is full-time and will last for a minimum of 6 months. The chosen applicant will be involved in various target discovery and biomarker development projects in the Immunology and/or Immuno-Oncology... therapeutic areas. An ideal candidate has: • strong background in data analytics, strong coding skills, and solid understanding of human molecular biology and immunology. • familiar with R and ideally at least one other programming language (eg, Python, Perl or Java). • Previous participation in research projects is highly desirable, as is some experience in RShiny app development. • Experience working in a Linux environment, AWS, and methodologies for reproducible research (e.g., git, markdown) would be an advantage. Students enrolled in Bioinformatics master's/PhD degree programs are strongly encouraged to apply, but students from computer science, data analytics, and related programs will be considered as well. As part of this position, the student will have the chance to conduct analyses to generate and validate scientific hypotheses, develop presentations showcasing their results, draft reports, and present their discoveries to project teams. Computational work will include benchmarking new published algorithms and packages, network and pathway analyses of gene expression, creating classifiers with AI/ML methods, building complex Rshiny app to visualize profiling data from patients with different autoimmune disorders. Past projects have focused on sorted-cell RNASeq from Lupus patients, development of the drug-specific genomic signature, analysis of the data from various single-cell technologies, building time-series models based on text-mining data, analysis of immuno-therapy effects on tumor models, and finding rational drug combinations. While specific projects will depend on the time of joining, a specific project plan will be developed for each student at the beginning of the co-op period. The student will learn how to address specific biological questions using different bioinformatics techniques as well as gain better understanding of drug development for auto-immune diseases and immuno-oncology. The student will also be able to participate in group and departmental meetings and seminars to learn about computational work at a pharmaceutical company and about all stages of drug development. The co-op program is designed to have candidates carry out impactful and reproducible research and develop interest/passion in different areas of data analytics/bioinformatics and to help improve programming and other skills. Our past alumni have become successful PhD students in top Universities, or bioinformaticians in prominent pharmaceutical companies with the help and training provided as a part of the program. The applicant must have US work authorization. This work can be done entirely remotely and the candidate can work from any US location, though Boston area is preferred. Hours are flexible but need alignment with US east coast and European working hours

Assistant Scientist, Bioinformatics - School of Medicine...

Atlanta, GA
2023/10/07.

Discover Your Career at Emory University Emory University is a leading research university that fosters excellence and attracts world-class talent to innovate today and prepare leaders for the future. We welcome candidates who can contribute to the diversity and excellence of our academic community... Description JOB DESCRIPTION: • Under minimal supervision, the Assistant Scientist, Bioinformatics performs a wide range of highly technical and complex bioinformatics procedures. • Qualification for this position requires demonstrated expertise in designing and developing software, databases, and interfaces for analyzing and manipulating research data applications including expertise with simple programming using Perl/Python or Java, statistical programming, web-development, and database query through SQL. • This role collaborates with researchers to develop high throughput data processing and analysis capability. • Directs and guides database searches and the computational analysis of resulting data. • Provides direct technical support and helps guide, implement, and maintain further improvements to bioinformatics software, databases, and interfaces and works with the entire bioinformatics team to diagnose and fix related issues. • May assist in grant and other funding applications, as necessary and appropriate. • Demonstrated ability to function as part of a team. • Performs other responsibilities as required. MINIMUM QUALIFICATIONS: • PhD in bioinformatics, computer science, biological or physical science and three years of experience. Experience prior to achieving the PhD will be considered. NOTE: Position tasks are generally required to be performed in-person at an Emory University location. Remote work from home day options m ay be granted at department discretion. Emory reserves the right to change remote work status with notice to employee Emory Supports a Diverse and Inclusive Culture Emory University is dedicated to providing equal opportunities and equal access to all individuals regardless of race, color, religion, ethnic or national origin, gender, genetic information, age, disability, sexual orientation, gender identity, gender expression, and veteran's status. Emory University does not discriminate in admissions, educational programs, or employment on the basis of any factor stated above or prohibited under applicable law. Students, faculty, and staff are assured of participation in University programs and in the use of facilities without such discrimination. Emory University complies with Executive Order 11246, as amended, Section 503 of the Rehabilitation Act of 1973, the Vietnam Era Veteran's Readjustment Assistance Act, and applicable executive orders, federal and state regulations regarding nondiscrimination, equal opportunity and affirmative action. Emory University is committed to achieving a diverse workforce through application of its affirmative action, equal opportunity and nondiscrimination policy in all aspects of employment including recruitment, hiring, promotions, transfers, discipline, terminations, wage and salary administration, benefits, and training. Inquiries regarding this policy should be directed to the Emory University Department of Equity and Inclusion, 201 Dowman Drive, Administration Building, Atlanta, GA 30322.Emory University is committed to providing reasonable accommodations to qualified individuals with disabilities upon request. To request this document in an alternate format or to request a reasonable accommodation, please contact the Department of Accessibility Services at 404-727-9877 (V) | 404-712-2049 (TDD). Please note that one week advance notice is preferred

Bioinformatics Analyst

Atlanta, GA
2023/10/07.

Discover Your Career at Emory University: Emory University is a leading research university that fosters excellence and attracts world-class talent to innovate today and prepare leaders for the future. We welcome candidates who can contribute to the diversity and excellence of our academic community... Description: JOB DESCRIPTION: Maintains software, hardware and the network in a bioinformatics setting or molecular modeling laboratory. Supervises regular updates and recommends state-of-the-art enhancements. Analyzes high throughput screening data and performs structure activity analyses to generate predictive correlations. Applies a limited range of molecular modeling tools to refinement of high throughput screening hits. Presents the models in a form that allows users to make decisions concerning the direction of an experimental program. Performs related responsibilities as required. MINIMUM QUALIFICATIONS: A master's degree in chemistry, biochemistry, bioinformatics or related field. Two years of experience in bioinformatics and/or computational chemistry. NOTE: This role will be granted the opportunity to work from home regularly but must be able to commute to Emory University location as needed. Emory reserves the right to change this status with notice to employee. Emory Supports a Diverse and Inclusive Culture: To ensure the safety of our campus community, the COVID-19 vaccine is required. For more information on the University and Hospital policies and potential exemptions, please see our website. Emory University is dedicated to providing equal opportunities and equal access to all individuals regardless of race, color, religion, ethnic or national origin, gender, genetic information, age, disability, sexual orientation, gender identity, gender expression, and veteran's status. Emory University does not discriminate in admissions, educational programs, or employment on the basis of any factor stated above or prohibited under applicable law. Students, faculty, and staff are assured of participation in University programs and in the use of facilities without such discrimination. Emory University complies with Executive Order 11246, as amended, Section 503 of the Rehabilitation Act of 1973, the Vietnam Era Veteran's Readjustment Assistance Act, and applicable executive orders, federal and state regulations regarding nondiscrimination, equal opportunity and affirmative action. Emory University is committed to achieving a diverse workforce through application of its affirmative action, equal opportunity and nondiscrimination policy in all aspects of employment including recruitment, hiring, promotions, transfers, discipline, terminations, wage and salary administration, benefits, and training. Inquiries regarding this policy should be directed to the Emory University Department of Equity and Inclusion, 201 Dowman Drive, Administration Building, Atlanta, GA 30322. Telephone: (phone number removed) (V) | (phone number removed) (TDD). Emory University is committed to providing reasonable accommodations to qualified individuals with disabilities upon request. To request this document in an alternate format or to request a reasonable accommodation, please contact the Department of Accessibility Services at (phone number removed) (V) | (phone number removed) (TDD). Please note that one week advance notice is preferred

Biology Assistant Professor in Bioinformatics

Decatur, GA
2023/10/07.

Biology Assistant Professor in Bioinformatics Position... Assistant Professor in Bioinformatics Type: Tenure-track Faculty Department/Program: Biology The Agnes Scott College Biology Department invites applications for a tenure-track position at the Assistant Professor level in bioinformatics or related area to begin August of 2024. The ideal candidate will carry out original research that will incorporate undergraduates. The biology department faculty retain research laboratories and collaborative efforts may be forged with other local institutions. The successful candidate will have a Ph.D. by August of 2024. Post-doctoral and teaching experience is desired. Applicants should demonstrate a commitment to work with a socially and economically diverse student population We seek a broadly-trained biologist who will excel in inclusive, undergraduate teaching and engage undergraduate students in their productive research program. In addition to the biology major program, the biology department contributes to programs in neuroscience, biochemistry and molecular biology, environmental and sustainability studies, and public health. The 3/2 teaching load includes Introductory Biology, Bioinformatics, Molecular Genetics, a senior seminar course, courses in areas of specialty, and contribution to SUMMIT, the college’s global learning and leadership development initiative. The college is committed to providing its faculty with a supportive academic environment that includes a balance of teaching, research, and service. Evaluations for promotion and tenure consider excellence in undergraduate teaching, establishing an effective and sustainable research program that is accessible to undergraduates, and service to students, the biology department, and the college. Support for faculty research and development includes travel funds, a one-semester research leave after successful completion of the third-year review, a post-tenure sabbatical program, and the opportunity to apply for internal professional development awards. To apply, e-mail curriculum vitae, teaching statement, research statement, diversity statement, and three letters of recommendation to: Prof. Lock Rogers , Chair, Department of Biology, . Teaching evaluations will be solicited from selected candidates later in the hiring process. Review of applications will begin on October 1, 2023. Agnes Scott College is a highly selective, independent, national liberal arts college for women located in metropolitan Atlanta, a cosmopolitan and ethnically diverse region with a vibrant cultural life. The college has been nationally recognized for innovation, a highly diverse student population, and excellence in teaching and is committed to providing its faculty with a supportive academic environment. All faculty reviews evaluate the candidate’s performance in the areas of teaching, scholarship, and service, with the highest priority given to teaching. Support for faculty development includes travel funding, a one-semester research leave at full pay after successful completion of the third-year review, a post-tenure sabbatical program, and the opportunity to apply for internal professional development awards. An equal opportunity employer, Agnes Scott College does not discriminate on the basis of race, color, national origin, religion, sex, sexual orientation, age, veteran status, disability or genetic information, gender identity, gender expression or any other characteristic protected by law in its employment. Agnes Scott College has a strong commitment to diversity and urges members of underrepresented groups to apply

Department of Biostatistics and Bioinformatics- Faculty Position ...

Atlanta, GA
2023/10/07.

Discover Your Career at Emory University Emory University is a leading research university that fosters excellence and attracts world-class talent to innovate today and prepare leaders for the future. We welcome candidates who can contribute to the diversity and excellence of our academic community. Description... JOB DESCRIPTION: The Department of Biostatistics and Bioinformatics at the Rollins School of Public Health of Emory University is recruiting several open-rank tenured- (tenure track), research-, and teaching-track faculty positions. We seek candidates with expertise and interests in any area of biostatistics and bioinformatics, with a particular interest in (1) tenured or tenure-track candidates with expertise in bioinformatics, AI and machine learning, (2) tenured or tenure-track candidates with expertise in computational statistics, imaging and functional data, (3) research-track candidates with expertise in pediatric imaging, and (4) teaching-track faculty with experience in biostatistical education for broad audiences. Academic rank will be commensurate with credentials and experience. Responsibilities associated included methodological research, collaborative research, teaching and mentoring, the balance of which will depend on candidates’ interest and track. MINIMUM QUALIFICATIONS: A PhD degree in statistics, biostatistics, bioinformatics, or a related field for tenure-track and research-track positions, and PhD or masters degree and extensive teaching experience for teaching-track position. DESIRED QUALIFICATIONS: Tenure-track candidates should have demonstrated either a track-record or potential for leading an innovative methodological research program and a commitment to graduate student education. Experience in bioinformatics, AI and ML is particularly desired. Research-track candidates should have demonstrated either a track-record or potential for conducting high-impact work within transdisciplinary teams. Experience in statistical methods in pediatric imaging is particularly desired. Teaching-track candidates should have demonstrated a track-record of excellence in teaching statistical and data science courses to both biostatistics students, as well as to broader audiences. The department includes 35 primary faculty members currently supported by a wide range of external funding. Faculty engage in diverse methodological research areas with specific motivation from an equally broad array of public health focus areas, including Alzheimer’s disease, infectious diseases, cancer, cardiovascular and renal disease, epidemiological surveillance, and environmental and mental health. The department participates in the Georgia Clinical and Translational Science Alliance, serves as the Data Coordinating Center for several NIH clinical trials, and operates the Biostatistics Collaborative Core. The department offers a doctoral graduate program in Biostatistics, master’s degree programs in Biostatistics, and participates in an interdisciplinary doctoral program in Computer Science and Informatics. Collaborative opportunities exist within the Rollins School of Public Health and throughout Emory’s Woodruff Health Sciences Center including the School of Medicine, the Alzheimer’s Disease Research Center, the Winship Cancer Institute, Emory National Primate Center, the Vaccine Center, the Center for AIDS Research, and with nearby partner institutions the VA Medical Center and the Centers for Disease Control and Prevention. Emory University is committed to inclusion and equity in the recruitment and retention of faculty. The university diligently supports the training of historically underrepresented and underserved communities. We welcome candidates who can contribute to the diversity and excellence of our academic community. Emory University is an equal employment opportunity and affirmative action employer. Women, minorities, people with disabilities and veterans are strongly encouraged to apply. Applicants for any position must apply to the job posting by uploading a cover letter, a complete curriculum vitae, a statement of research interests (optional for consideration for the teaching-track position), and a statement of teaching experience and philosophy (optional for consideration for the research-track position), and arrange for the submission of three reference letters. For questions, please contact Mary Abosi (mabosi@emory.edu). Formal review of applications will begin January 15, 2023 and continue until the position is filled. Successful candidates must be authorized to work in the United States. Emory Supports a Diverse and Inclusive Culture Emory University is dedicated to providing equal opportunities and equal access to all individuals regardless of race, color, religion, ethnic or national origin, gender, genetic information, age, disability, sexual orientation, gender identity, gender expression, and veteran's status. Emory University does not discriminate in admissions, educational programs, or employment on the basis of any factor stated above or prohibited under applicable law. Students, faculty, and staff are assured of participation in University programs and in the use of facilities without such discrimination. Emory University complies with Executive Order 11246, as amended, Section 503 of the Rehabilitation Act of 1973, the Vietnam Era Veteran's Readjustment Assistance Act, and applicable executive orders, federal and state regulations regarding nondiscrimination, equal opportunity and affirmative action. Emory University is committed to achieving a diverse workforce through application of its affirmative action, equal opportunity and nondiscrimination policy in all aspects of employment including recruitment, hiring, promotions, transfers, discipline, terminations, wage and salary administration, benefits, and training. Inquiries regarding this policy should be directed to the Emory University Department of Equity and Inclusion, 201 Dowman Drive, Administration Building, Atlanta, GA 30322. Emory University is committed to providing reasonable accommodations to qualified individuals with disabilities upon request. To request this document in an alternate format or to request a reasonable accommodation, please contact the Department of Accessibility Services at 404-727-9877 (V) | 404-712-2049 (TDD). Please note that one week advance notice is preferred

Tenure-Track Assistant Professor in Bioinformatics and...

Atlanta, GA
2023/10/07.

Department of Computer Science Georgia State University... Tenure-Track Assistant Professor Bioinformatics and Computational Biology The Department of Computer Science (http://www.csds.gsu.edu/) at Georgia State University (GSU) is seeking to fill multiple tenure-track Assistant Professor positions by Fall 2024. The Computer Science Department offers programs leading to the B.S., M.S., and Ph.D. degrees in Computer Science and Data Science. As the Department is expanding its research profile, candidates with research interests and expertise in areas of Bioinformatics and Computational Biology, including Computational Genomics, Computational Epidemiology, AI and Deep Learning methods for multi-omics data modeling and integration are encouraged to apply. Applicants are expected to have: 1) a Ph.D. in computer science or a closely related field, 2) ability to establish and maintain a successful research program, 3) the ability to teach at the undergraduate and graduate levels, and 4) the ability to work in multidisciplinary settings. Applications should include 1) a CV, including a complete publication list; 2) a statement of research interests and a description of how this research is aligned with the areas outlined above, 3) a statement of teaching experience and philosophy; and 4) contact information for at least three references. All materials should be submitted via https://academicjobsonline.org/ajo/jobs/25685. Applications received by December 1, 2023, will receive full consideration. An offer of employment will be conditional on background verification. Georgia State University is an enterprising public R1 university located in downtown Atlanta, one of the largest and most diverse cities in the Southeastern U.S. with access to a metropolitan population of over 6 million. As a national leader in using innovation to drive student enrollment and success, Georgia State University is enrolling and graduating one of the most diverse student bodies in the nation. The university provides its world-class faculty and more than 50,000 students unsurpassed research, teaching, and learning opportunities. The 2022 U.S. News and World Reports rankings placed Georgia State University as the #2 public institution in undergraduate teaching and the #2 most innovative university in the country. The Computer Science department’s Ph.D. program is nationally competitive and ranked among the best in the Southeast, according to National Research Council data. The program also has a high rank in several categories at the PhDs.org website. The department’s faculty attracts substantial funding from many federal agencies, including several NSF CAREER Awards. The Department of Computer Science is expected to significantly grow its faculty and programs during the next three to five years. Georgia State University, a unit of the University System of Georgia, is an equal opportunity educational institution and an EEO/AA employer. All qualified applicants will receive consideration for employment without regard to race, color, religion, sex, sexual orientation, gender identity, national origin, disability, or status as a protected veteran

Scientist, Asst-School of Medicine: Bioinformatics

Atlanta, GA
2023/10/07.

Discover Your Career at Emory University Emory University is a leading research university that fosters excellence and attracts world-class talent to innovate today and prepare leaders for the future. We welcome candidates who can contribute to the diversity and excellence of our academic community... Description Under minimal supervision, the Assistant Scientist, Bioinformatics (ASB) performs a wide range of highly technical and complex informatics procedures. Qualification for this position requires demonstrated expertise in designing and developing software, databases, and interfaces for analyzing and manipulating research data applications including expertise with programming using a combination of the following: Python, MATLAB, machine learning and statistical programming, web-development, database query through SQL, high-performance computing, and scientific computing. This role requires internal and external collaboration with researchers to develop reproducible data processing and analysis capabilities, operating on Linux on local compute clusters and in the cloud (GCP, AWS, and Azure) using and developing command-line tools. The ASB is responsible for database construction, searching, and the computational analysis of resulting data. The ASB provides direct technical support and helps guide, implement, and maintain further improvements to informatics software, databases, and interfaces and works with the entire research and engineering team to diagnose and fix related issues. The ASB facilitates communication between the research and engineering team members and supports the organization and timely progress of their efforts. The ASB will document code and data, contribute to research articles, respond to external queries via email, the web, and through managed lists. The ASB may assist in grant and other funding applications, as necessary and appropriate. Demonstrated ability to function as part of a team is important. Performs other responsibilities as required. JOB DESCRIPTION: • Under minimal supervision, the Assistant Scientist, Bioinformatics performs a wide range of highly technical and complex bioinformatics procedures. • Qualification for this position requires demonstrated expertise in designing and developing software, databases, and interfaces for analyzing and manipulating research data applications including expertise with simple programming using Perl/Python or Java, statistical programming, web-development, and database query through SQL. • This role collaborates with researchers to develop high throughput data processing and analysis capability. • Directs and guides database searches and the computational analysis of resulting data. Provides direct technical support and helps guide, implement, and maintain further improvements to bioinformatics software, databases, and interfaces and works with the entire bioinformatics team to diagnose and fix related issues. • May assist in grant and other funding applications, as necessary and appropriate. • Demonstrated ability to function as part of a team. • Performs other responsibilities as required. MINIMUM QUALIFICATIONS: • PhD in bioinformatics, computer science, biological or physical science and three years of experience. • Experience prior to achieving the PhD will be considered. NOTE: This role will be granted the opportunity to work from home regularly but must be able to commute to Emory University on a flexible weekly schedule based upon business needs. Schedule is based on agreed upon guidelines of department of work. Emory reserves the right to change remote work status with notice to employee. Emory Supports a Diverse and Inclusive Culture Emory University is dedicated to providing equal opportunities and equal access to all individuals regardless of race, color, religion, ethnic or national origin, gender, genetic information, age, disability, sexual orientation, gender identity, gender expression, and veteran's status. Emory University does not discriminate in admissions, educational programs, or employment on the basis of any factor stated above or prohibited under applicable law. Students, faculty, and staff are assured of participation in University programs and in the use of facilities without such discrimination. Emory University complies with Executive Order 11246, as amended, Section 503 of the Rehabilitation Act of 1973, the Vietnam Era Veteran's Readjustment Assistance Act, and applicable executive orders, federal and state regulations regarding nondiscrimination, equal opportunity and affirmative action. Emory University is committed to achieving a diverse workforce through application of its affirmative action, equal opportunity and nondiscrimination policy in all aspects of employment including recruitment, hiring, promotions, transfers, discipline, terminations, wage and salary administration, benefits, and training. Inquiries regarding this policy should be directed to the Emory University Department of Equity and Inclusion, 201 Dowman Drive, Administration Building, Atlanta, GA 30322. Emory University is committed to providing reasonable accommodations to qualified individuals with disabilities upon request. To request this document in an alternate format or to request a reasonable accommodation, please contact the Department of Accessibility Services at 404-727-9877 (V) | 404-712-2049 (TDD). Please note that one week advance notice is preferred

Bioinformatics Analyst - School of Medicine, Microbiology/Immunology

Atlanta, GA
2023/10/07.

Discover Your Career at Emory University Emory University is a leading research university that fosters excellence and attracts world-class talent to innovate today and prepare leaders for the future. We welcome candidates who can contribute to the diversity and excellence of our academic community... Description Our labs study epigenetic and transcriptional programs that regulate immune responses using cutting edge molecular and cellular immunology approaches, genomics, and bioinformatics. Specific projects include: i) the epigenetic regulation of memory B cell responses in murine influenza models; ii) B cell dysfunction in human autoimmune diseases; iii) the role of epigenetic modifying complexes and transcription factors in plasma cell differentiation, and iv) factors influencing MHC-II and PD-1 gene expression. We are seeking a bioinformatician to join our growing team to analyze next-gen sequencing datasets. Preference will be given to individuals with experience in 10x single-cell platforms, RNA-seq, ATAC-seq, ChIP-seq, and DNA-methyl-seq. Additional experience in statistical genetics, eQTL analysis, or working with genomic variation will be considered. Our bioinformatics team serves a core group of 6-12 investigators by facilitating initial data processing and QC, data management, data sharing within the group, developing algorithms and computational workflows, developing and maintaining software, and analyzing and integrating transcriptome and epigenomic data using a variety of state-of-the-art statistical and data mining techniques. This position will contribute to the development and application of computational workflows for processing, analyzing, and visualizing data. A successful candidate will be able to synthesize data for publication and work closely with bench scientists. This position will provide opportunities for multiple publications, cross-disciplinary collaborations, and experience in integrating multiple data with clinical outcomes and other –omics data. Performs related responsibilities as required. Preference will be given to candidates with immunology background, experience with 10x single-cell workflows, R/Bioconductor programming, Shiny apps, and GitHub/Bitbucket. JOB DESCRIPTION: • Maintains software, hardware and the network in a bioinformatics setting or molecular modeling laboratory. • Supervises regular updates and recommends state-of-the-art enhancements. • Analyzes high throughput screening data and performs structure activity analyses to generate predictive correlations. • Applies a limited range of molecular modeling tools to refinement of high throughput screening hits. • Presents the models in a form that allows users to make decisions concerning the direction of an experimental program. • Performs related responsibilities as required. MINIMUM QUALIFICATIONS: • A master's degree in biology, biostatistics, chemistry, biochemistry, bioinformatics or related science or IT-based discipline; some student-related experience gained through formal Master's-level academic training. NOTE: Position tasks are generally required to be performed in-person at an Emory University location. Remote work from home day options m ay be granted at department discretion. Emory reserves the right to change remote work status with notice to employee. Emory Supports a Diverse and Inclusive Culture Emory University is dedicated to providing equal opportunities and equal access to all individuals regardless of race, color, religion, ethnic or national origin, gender, genetic information, age, disability, sexual orientation, gender identity, gender expression, and veteran's status. Emory University does not discriminate in admissions, educational programs, or employment on the basis of any factor stated above or prohibited under applicable law. Students, faculty, and staff are assured of participation in University programs and in the use of facilities without such discrimination. Emory University complies with Executive Order 11246, as amended, Section 503 of the Rehabilitation Act of 1973, the Vietnam Era Veteran's Readjustment Assistance Act, and applicable executive orders, federal and state regulations regarding nondiscrimination, equal opportunity and affirmative action. Emory University is committed to achieving a diverse workforce through application of its affirmative action, equal opportunity and nondiscrimination policy in all aspects of employment including recruitment, hiring, promotions, transfers, discipline, terminations, wage and salary administration, benefits, and training. Inquiries regarding this policy should be directed to the Emory University Department of Equity and Inclusion, 201 Dowman Drive, Administration Building, Atlanta, GA 30322.Emory University is committed to providing reasonable accommodations to qualified individuals with disabilities upon request. To request this document in an alternate format or to request a reasonable accommodation, please contact the Department of Accessibility Services at 404-727-9877 (V) | 404-712-2049 (TDD). Please note that one week advance notice is preferred

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